Publications

A full list of publications can be found at Google Scholar

• Ma J.*, Li Y., Chunyan Hou, Ci Wu. O-GlcNAcAtlas: A Database of Experimentally Identified O-GlcNAc Sites and Proteins. Glycobiology 2021, DOI: 10.1093/glycob/cwab003.
• Ma J.*, Wu C., Hart G.W. Analytical and biochemical perspectives of protein O-GlcNAcylation. Chemical Reviews 2021, DOI: 10.1021/acs.chemrev.0c00884.
• Girgis M., Li Y., Ma J., Sanda M., Wise S.Y., Fatanmi O.O., Kaytor M.D., Cheema A.K., Singh V.K. Comparative proteomic analysis of serum from nonhuman primates administered BIO 300: a promising radiation countermeasure. Scientific reports 2020, 10(1), 1-11.
• Hardivillé S., Banerjee P.S., Alpergin E.S.S., Smith D.M., Han G., Ma J., Talbot C.C., Hu P., Wolfgang M.J., Hart G.W. TATA-Box Binding Protein O-GlcNAcylation at T114 Regulates Formation of the B-TFIID Complex and Is Critical for Metabolic Gene Regulation. Molecular cell 2020, 77(5), 1143-1152.e7
• Ma J.*, Wang W., Li Z., Shabanowitz J., Hunt D.F., Hart G.W. O-GlcNAc site mapping by using a combination of chemoenzymatic labeling, copper-free click chemistry, reductive cleavage, and electron-transfer dissociation mass spectrometry. Analytical Chemistry 2019, 91(4), 2620-2625.
• Aldeghaither D., Zahavi D., Murray J., Fertig E., Graham G., Zhang Y.W., O’Connell A., Ma J., Jablonski S., Weiner L. A mechanism of resistance to antibody-targeted immune attack. Cancer Immunology Research 2019, 7(2), 230-243.
• Gourgari E., Ma J., Playford M.P., Mehta N.N., Goldman R., Remaley A.T., Gordon S.M. Proteomic alterations of HDL in youth with type 1 diabetes and their associations with glycemic control: a case-control study. Cardiovascular Diabetology 2019, 18, 43.
• Ma J., Sanda M., Wei R., Zhang L., Goldman R. Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM. Journal of Proteomics 2018, 189, 67-74.
• Coia H., Ma N., Hou Y., Dyba M., Fu Y., Cruz M.I., Benliez C., Graham G., McCutcheon J., Zheng Y.L., Sun B., Kallakury B., Ma J., Fang H.B., Berry D., Muralidaran V., Chung F.L. Prevention of lipid peroxidation-derived cyclic DNA adduct and mutation in high-fat diet-induced hepatocarcinogenesis by Theaphenon E. Cancer Prevention Research 2018, 11(10), 665-676.
• Wang T., Chen Y., Ma J., Jin Z., Chai M., Xiao X., Zhang L., Zhang Y. A polyethyleneimine-modified attapulgite as a novel solid support in matrix solid-phase dispersion for the extraction of cadmium traces in seafood products. Talanta 2018, 180, 254-259.
• Ma J., Hart G.W. Analysis of Protein O-GlcNAcylation by Mass Spectrometry. Current Protocols in Protein Science, Wiley. 2017, UNIT 24.10. DOI: 10.1002/cpps.24
• Wang T., Ma J., Chen Y., Li Y., Zhang L., Zhang Y. Analysis of melamine and analogs in complex matrices: Advances and trends. Journal of Separation Science 2017, 40 (1), 170-182.
• Wang T., Chen Y., Ma J., Qian Q., Jin Z., Zhang L., Zhang Y. Attapulgite nanoparticles-modified monolithic column for hydrophilic in-tube solid-phase microextraction of cyromazine and melamine. Analytical chemistry 88 (3), 1535-1541.
• Ma J., Baneerj P., Whelan S., Liu T., Wei A., Ramirez-Cortrea G.A., Costello C., Mccomb M., O’Rourke B., Murphy A.M., Hart G.W. Comparative proteomics reveals dysregulated mitochondrial O-GlcNAcylation in diabetic hearts. Journal of Proteome Research 2016, 15, 2254-2264.
• Ma J., Hart G.W. Mass spectrometry-based quantitative O-GlcNAcomic analysis. Methods in Molecular Biology (in the book ‘Quantative Proteomics by Mass Spectrometry’ edited by Sechi Salvatore), Humana Press. 2016, 1410:91-103.
• Ma J., Liu T., Wei A., Baneerj P., O’Rourke B., Hart G.W. O-GlcNAcomics reveals cardiac mitochondrial functions by protein O-GlcNAcylation. Journal of Biological Chemistry 2015, 290, 29141-29153.
• Ramirez-Cortrea G.A., Ma J., Slawson C., Zeidan Q., Shen X., Gao W., Caceres V., Paolocci N., Hart G.W., Murphy A.M. Removal of abnormal myofilament O-GlcNAcylation restores Ca2+ sensitivity in diabetic cardiac muscle. Diabetes 2015, 64, 3573-3587.
• Baneerj P., Ma J., Hart G.W. Diabetes associated dysregulation of O-GlcNAcylation in rat cardiac mitochondria. Proceedings of National Academy of Sciences USA 2015, 112, 6050-6055.
• Ma J., Hart G.W. O-GlcNAc profiling: from proteins to proteomes. Clinical Proteomics 2014, 11:8.
• Wang T., Chen Y., Ma J., Hu M., Li Y., Jia Z., Fang J., Gao H. A novel ionic liquid-modified organic-polymer monolith as the sorbent for in-tube solid-phase microextraction of acidic food additives. Analytical and Bioanalytical Chemistry 2014, 406, 4955-4963.
• Chen Y., Wang T., Ma J., Liang Z., Chen M., Fang J., Gao H., Zhang L., Zhang Y. Application of an ampholine-functionalized hybrid organic–inorganic silica material for the SPE of aromatic amines. Journal of Separation Science 2014, 37, 143-150.
• Ma J., Hart G.W. Protein O-GlcNAcylation in diabetes and diabetic complications. Expert Review in Proteomics 2013, 10, 365-380.
• Wang T., Chen Y., Ma J., Chen M., Nie C., Hu M., Li Y., Jia Z., Fang J., Gao H. Ampholine-functionalized hybrid organic-inorganic silica material as sorbent for solid-phase extraction of acidic and basic compounds. Journal of Chromatography A 2013, 1308, 63-72.
• Ma J., Zhang L., Liang Z., Shan Y., Zhang Y. Immobilized enzyme reactors in proteomics. Trends in Analytical Chemistry 2011, 30(5), 691-702.
• Ma J., Hou C., Liang Y., Wang T., Zhang L., Zhang Y. Efficient proteolysis using a regenerable metal-ion chelate immobilized enzyme reactor supported on organic-inorganic hybrid silica monolith. Proteomics 2011, 11(5), 991-995.
• Wu S., Ma J., Yang K., Liu J., Liang Z., Zhang L., Zhang Y. A novel organic-inorganic hybrid monolith for trypsin immobilization. Science in China C: Life Sciences 2011, 54(1), 54-9.
• Wang T., Ma J., Wu S., Sun L., Yuan H., Zhang L., Liang Z., Zhang Y. On-line combination of monolithic immobilized pH gradient-based capillary isoelectric focusing and capillary zone electrophoresis via a partially etched porous interface for protein analysis. Journal of Chromatography B-Analytical Technologies in the Biomedical and Life Sciences 2011, 879(11-12), 804-810.
• Hou C., Ma J., Tao D., Zhang L., Liang Z., Zhang Y. Phosphorylated membrane proteomics of SY-5Y cells. Chinese Journal of Chromatography 2011, 29(9), 851-856.
• Wang T, Ma J., Wu S., Yuan H., Zhang L., Liang Z., Zhang Y. Integrated platform of capillary isoelectric focusing, trypsin immobilized enzyme microreactor and nano-reversed-phase liquid chromatography with mass spectrometry for online protein profiling. Electrophoresis 2011, 32, 2848-2856.
• Liang Y., Tao D., Ma J., Sun L., Liang Z., Zhang L., Zhang Y. Hydrophilic monolith based immobilized enzyme reactors in capillary and on microchip for high-throughput proteomic analysis. Journal of Chromatography A 2011, 1218(20), 2898-2905.
• Wu S., Sun L., Ma J., Yang K., Liang Z., Zhang L., Zhang Y. High throughput tryptic digestion via poly (acrylamide-co-methylenebisacrylamide) monolith based immobilized enzyme reactor. Talanta 2011, 83, 1748–1753.
• Wang T., Fekete A., Gaspar A., Ma J., Liang Z, Yuan H., Zhang L., Schmitt-Kopplin P., Zhang Y. Analysis of low molecular weight acids by monolithic immobilized pH gradient-based capillary isoelectric focusing coupled with mass spectrometry. Journal of Separation Science 2011, 34(4), 422-427.
• Zhang L., Jin X., Sun L., Ma J., Yang K., Liang Z., Zhang L., Zhang Y. Zirconium oxide aerogel for effective enrichment of phosphopeptides with high binding capacity. Analytical and Bioanalytical Chemistry 2011, 399, 3399-3405.
• Sun L., Tao D., Han B., Ma J., Zhu G., Liang Z., Shan Y., Zhang L., Zhang Y. Ionic liquid 1-butyl-3-methyl imidazolium tetrafluoroborate for shotgun membrane proteomics. Analytical and Bioanalytical Chemistry 2011, 399(10), 3387-3397.
• Ma J., Hou C., Sun L., Tao D., Zhang Y., Shan Y., Liang Z., Zhang L., Zhang Y. Coupling formic acid assisted solubilization and online immobilized pepsin microreactor digestion with SCX-μPRLC-ESI-MS/MS for integral membrane proteome analysis. Analytical Chemistry 2010, 82, 9622-9625.
• Hou C., Ma J., Tao D., Shan Y., Liang Z., Zhang L., Zhang Y. Organic-inorganic hybrid silica monolith based immobilized titanium ion affinity chromatography column for analysis of mitochondrial phosphoproteome. Journal of Proteome Research 2010, 9(8), 4093-4101.
• Sun L., Ma J., Sun X., Tao D., Zhang Y., Shan Y., Liang Z., Zhang L., Zhang Y. Intergrated device for online sample buffer exchange, protein enrichment, and digestion. Analytical Chemistry 2010, 82(6), 2574-2579.
• Wang T., Ma J., Zhu G., Shan Y., Liang Z., Zhang L., Zhang Y. Integration of capillary isoelectric focusing with monolithic immobilized pH gradient, immobilized trypsin microreactor and capillary zone electrophoresis for on-line protein analysis. Journal of Separation Science 2010, 33(20), 3194-3200.
• Wu S., Ma J., Yang K., Liu J., Liang Z., Zhang L., Zhang Y. An epoxy-based organic-inorganic hybrid silica monolith microreactor. Science in China C: Life Sciences 2010, 40(9), 874-879.
• Ma J.; Liu J., Sun L., Gao L., Liang Z., Zhang L., Zhang Y. On-line integration of multiple sample pretreatment steps involving denaturation, reduction, and digestion with microflow reversed-phase liquid chromatography-electrospray ionization tandem mass spectrometry for high throughput proteome profiling. Analytical Chemistry 2009, 81, 6534-6540.
• Ma J., Zhang L., Liang Z., Zhang W., Zhang Y. Recent advances in immobilized enzymatic reactors and their applications in proteome analysis. Analytica Chemica Acta 2009, 632, 1-8.
• Qiao X., Wang L., Ma J., Deng Q., Liang L., Zhang L., Peng X., Zhang Y. High sensitivity analysis of water-soluble, cyanine dye labeled proteins by high-performance liquid chromatography with fluorescence detection. Analytica Chimica Acta 2009, 114-120.
• Tao D., Zhu G., Sun L., Ma J., Liang Z., Zhang W., Zhang L., Zhang Y. Serially coupled microcolumn reversed phase liquid chromatography for shotgun proteomic analysis. Proteomics 2009, 2029-2036.
• Ma J., Liang Z., Qiao X., Deng Q., Tao D., Zhang L., Zhang Y. Organic-inorganic hybrid silica monolith based immobilized trypsin reactor with high enzymatic activity. Analytical Chemistry 2008, 80, 2948-2956.
• Ma J., Zhang L., Liang Z., Zhang W., Zhang Y. Monolith-based immobilized enzyme reactors: Recent developments and applications for proteome analysis. Journal of Separation Science 2007, 30, 3050-3059.